Changeset 13050 in project
 Timestamp:
 01/21/09 02:55:43 (12 years ago)
 Location:
 release/3/nemo/trunk
 Files:

 3 edited
Legend:
 Unmodified
 Added
 Removed

release/3/nemo/trunk/examples/carelli05.nemo
r13040 r13050 113 113 (component (type ionchannel) (name KCa) 114 114 115 (hhionicconductance 116 (KCa 117 (mpower 4) 118 (hpower 0) 119 (initialm ((Ca / (3 + Ca)) * (1 / (1 + (exp ((Vrest + 28.3) / 12.6)))))) 120 (minf ((Ca / (3 + Ca)) * (1 / (1 + (exp ((v + 28.3) / 12.6)))))) 121 (mtau (180.6  (150.2 / (1 + (exp ((v + 46) / 22.7)))))))) 115 (component (type gate) 116 117 (hhionicconductance 118 (KCa 119 (mpower 4) 120 (hpower 0) 121 (initialm ((Ca / (3 + Ca)) * (1 / (1 + (exp ((Vrest + 28.3) / 12.6)))))) 122 (minf ((Ca / (3 + Ca)) * (1 / (1 + (exp ((v + 28.3) / 12.6)))))) 123 (mtau (180.6  (150.2 / (1 + (exp ((v + 46) / 22.7)))))))) 124 ) 122 125 123 126 (component (type pore) … … 133 136 (component (type ionchannel) (name Kd) 134 137 135 (hhionicconductance 136 (Kd 137 (mpower 4) 138 (hpower 0) 139 (initialm (1 / (1 + (exp ((Vrest + 12.3) / 11.8))))) 140 (minf (1 / (1 + (exp ((v + 12.3) / 11.8))))) 141 (mtau (14.4  (12.8 / (exp ((v + 28.3) / 19.2))))))) 138 (component (type gate) 139 140 (hhionicconductance 141 (Kd 142 (mpower 4) 143 (hpower 0) 144 (initialm (1 / (1 + (exp ((Vrest + 12.3) / 11.8))))) 145 (minf (1 / (1 + (exp ((v + 12.3) / 11.8))))) 146 (mtau (14.4  (12.8 / (exp ((v + 28.3) / 19.2))))))) 147 ) 142 148 143 149 (component (type pore) … … 153 159 (component (type ionchannel) (name A) 154 160 155 (hhionicconductance 156 (A 157 (gbar 50) 158 (mpower 3) 159 (hpower 1) 160 (initialm (1 / (1 + (exp ((Vrest + 27.2) / 8.7))))) 161 (initialh (1 / (1 + (exp ((Vrest + 56.9) / 4.9))))) 162 (minf (1 / (1 + (exp ((v + 27.2) / 8.7))))) 163 (hinf (1 / (1 + (exp ((v + 56.9) / 4.9))))) 164 (mtau (23.2  (20.8 / (1 + (exp ((v + 32.9) / 15.2)))))) 165 (htau (77.2  (58.4 / (1 + (exp ((v + 38.9) / 26.5)))))))) 161 (component (type gate) 162 163 (hhionicconductance 164 (A 165 (gbar 50) 166 (mpower 3) 167 (hpower 1) 168 (initialm (1 / (1 + (exp ((Vrest + 27.2) / 8.7))))) 169 (initialh (1 / (1 + (exp ((Vrest + 56.9) / 4.9))))) 170 (minf (1 / (1 + (exp ((v + 27.2) / 8.7))))) 171 (hinf (1 / (1 + (exp ((v + 56.9) / 4.9))))) 172 (mtau (23.2  (20.8 / (1 + (exp ((v + 32.9) / 15.2)))))) 173 (htau (77.2  (58.4 / (1 + (exp ((v + 38.9) / 26.5)))))))) 174 ) 166 175 167 176 (component (type pore) … … 175 184 176 185 (component (type ionchannel) (name H) 177 178 (hhionicconductance 179 (H 180 (mpower 1) 181 (hpower 0) 182 (initialm (1 / (1 + (exp ((Vrest + 75) / 5.5))))) 183 (minf (1 / (1 + (exp ((v + 75) / 5.5))))) 184 (mtau (2.2 / ((exp ((v + 169.7) / 11.6)) + (exp ((v  26.7) / 14.3))))))) 186 187 (component (type gate) 188 189 (hhionicconductance 190 (H 191 (mpower 1) 192 (hpower 0) 193 (initialm (1 / (1 + (exp ((Vrest + 75) / 5.5))))) 194 (minf (1 / (1 + (exp ((v + 75) / 5.5))))) 195 (mtau (2.2 / ((exp ((v + 169.7) / 11.6)) + (exp ((v  26.7) / 14.3))))))) 196 ) 185 197 186 198 (component (type pore) 
release/3/nemo/trunk/nemomatlab.scm
r13040 r13050 204 204 (let ((fx (formatexpr/MATLAB indent+ x))) fx)) rest))))) 205 205 206 (let ((op (case op ((neg) ') ( else op))))206 (let ((op (case op ((neg) ') ((ln) 'log) (else op)))) 207 207 (formatfncall/MATLAB indent op (map (lambda (x) (formatexpr/MATLAB indent+ x)) rest)))))) 208 208 (if rv 
release/3/nemo/trunk/nemonmodl.scm
r13012 r13050 834 834 (nemo:error 'nemo:nmodltranslator ": ion channel definition " label 835 835 (s+ "(" n ")") 836 "lacks permeatingsubstance or accumulatingsubstance " 837 "component")))) 836 "lacks gate component")))) 838 837 839 838 ((and acc pore gate)
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