Changeset 11997 in project

Timestamp:

09/25/08 10:04:25 (13 years ago)

Author:

Ivan Raikov

Message:

Now using all channels in the AKP example.

Location:

release/3/nemo/trunk/examples/AKP06

Files:

• PotIhCa.scm (modified) (1 diff)
• morphology_mechanisms.hoc (modified) (2 diffs)

release/3/nemo/trunk/examples/AKP06/PotIhCa.scm

@@ -157 +157 @@
                         ) ;; end Ih current
 
-;;           (component (type ion-channel) (name CaP)
-                        
-;;                      (component (type gate)
-                                   
-;;                                 ;; rate functions
-;;                                 (defun CaP_inf (v)  
-;;                                   (let ((cv  19)
-;;                                         (ck  5.5))
-;;                                     (/ 1.0 (+ 1.0 (exp (neg (/ (+ v cv) ck)))))))
-                                   
-;;                                 (defun CaP_tau (v)  
-;;                                   (if (> v -50) 
-;;                                       (* 1e3 (+ 0.000191 (* 0.00376 (pow (exp (neg (/ (+ v 41.9) 27.8)))  2))))
-;;                                       (* 1e3 (+ 0.00026367 (* 0.1278 (exp (* 0.10327 v)))))))
-
-;;                                 (hh-ionic-conductance 
-;;                                  (CaP  ;; ion name: exported variables will be of the form {ion}_{id}
-;;                                   (initial-m  (CaP_inf Vrest))
-;;                                   (m-power    1)
-;;                                   (h-power    0)
-;;                                   (m-inf      (CaP_inf v))
-;;                                   (m-tau      (/ (CaP_tau v) temp_adj))))
-                                   
-;;                                 )
-
-;;                      (component (type pore)
-;;                                 (const gmax_CaP  = 0.01667)
-;;                                 (gbar_CaP = (* gmax_CaP (ghk v celsius cai cao)))
-;;                                 (output gbar_CaP ))
-                        
-;;                      (component (type accumulating-substance) (name ca) )
-                        
-                        
-;;                      ) ;; end CaP current
+             (component (type ion-channel) (name CaP)
+                        
+                        (component (type gate)
+                                   
+                                   ;; rate functions
+                                   (defun CaP_inf (v)  
+                                     (let ((cv  19)  (ck  5.5))
+                                       (/ 1.0 (+ 1.0 (exp (neg (/ (+ v cv) ck)))))))
+                                   
+                                   (defun CaP_tau (v)  
+                                     (if (> v -50) 
+                                         (* 1e3 (+ 0.000191 (* 0.00376 (pow (exp (neg (/ (+ v 41.9) 27.8)))  2))))
+                                         (* 1e3 (+ 0.00026367 (* 0.1278 (exp (* 0.10327 v)))))))
+
+                                   (hh-ionic-conductance 
+                                    (CaP  ;; ion name: exported variables will be of the form {ion}_{id}
+                                     (initial-m  (CaP_inf Vrest))
+                                     (m-power    1)
+                                     (h-power    0)
+                                     (m-inf      (CaP_inf v))
+                                     (m-tau      (/ (CaP_tau v) temp_adj))))
+                                   
+                                   )
+
+                        (component (type pore)
+                                   (const gmax_CaP  = 0.01667)
+                                   (gbar_CaP = (* gmax_CaP (ghk v celsius cai cao)))
+                                   (output gbar_CaP ))
+                        
+                        (component (type accumulating-substance) (name ca) )
+                        
+                        
+                        ) ;; end CaP current
 
              

release/3/nemo/trunk/examples/AKP06/morphology_mechanisms.hoc

@@ -16 +16 @@
 //insert CaBK
 insert Caint
-insert CaP
+//insert CaP
 //insert Ih
 insert leak
@@ -37 +37 @@
 //soma.gkbar_CaBK = 0.014
 soma.gbar_CaBK_PotIhCa = 0.014
-soma.pcabar_CaP = 0.00006
-//soma.gmax_CaP_PotIhCa = 0.06
+//soma.pcabar_CaP = 0.00006
+soma.gmax_CaP_PotIhCa = 0.06
 //soma.ghbar_Ih = 0.0002
 soma.gbar_Ih_PotIhCa = 0.0002